Advanced Breeding Lab(Shu's lab) of Zhejiang University

CTREPs Identification (*required information)

Step1 - Select the vector type.

The vector type: *

Step2 - Create your analysis working directory and upload your data.

Project name (Job id):*

*It is recommended to name the project name such as "Rice_20191110" (crop_date) for registered users. For unregistered users, the name consists of at least 12 numbers or letters.

Step3 - Set the parameters and submit the job.

Organism: *

Organism(FASTA format):
(If not find in databases)

Sample file1:*
(Reads1 file of Paired-end Sequencing)

Rice-R08_1.fq.gz

Sample file2:*
(Reads2 file of Paired-end Sequencing)

Rice-R08_2.fq.gz

The name of the output: *

Vector genome(FASTA format):*

vector.fasta

Vector annotation(text format):*

vector.annot

------------------------------Other Parameters------------------------------

Start site of T-DNA in the vector:*

End site of T-DNA in the vector: *

The orientation of T-DNA: *

*"+" indicates that the T-DNA fragement is from the start site to the end site and "-" indicates that the T-DNA fragement is from the end site to the start site.

Analysis: *

Email (optional):

*The notification will be sent to you by email automatically when the job is finished.

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